BLASTN 2.2.18 Mar-02-2008
Reference: Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= Contig241
(1700 letters)
Database: /home/vicky/BKPVICKY/BLASTdb/tabaco.fasta
1 sequences; 430597 total letters
Searching................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|57013877|ref|NC_006581.1| Nicotiana tabacum mitochondrion ... 2030.4 0.0
>ref|NC_006581.1| Nicotiana tabacum mitochondrion, complete genome
Length = 430597
Score = 2030.42 bits (1024.0), Expect = 0.0
Identities = 1084/1107 (98%)
Strand = Plus/Minus
Query: 1107 GGAGAGGGGCTTCGCCTCGAATCCAAATGATTTCTCTTCTTCTCTTAAGATATTTCTAGT 1048
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 382349 GGAGAGGGGTTTCGCCTCGAATCCAAATGATTTCTCTTCTTCTCTTAAGATATTTCTAGT 382408
Query: 1047 TAGGACTTGATCGAGGGATCAATTGACTCCGAAACATAAAGTAACAAGACCATAACCCCG 988
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 382409 TAGGACTTGATCGAGGGATCAATTGACTCCGAAACATAAAGTAACAAGACCATAACCCCG 382468
Query: 987 TGCCCCCGCCTTAAAGGATCCCAACTCATCACCCTCATCTCCAACTTATTCGTGGTTTTA 928
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 382469 TGCCCCCGCCTTAAAGGATCCCAACTCATCACCCTCATCTCCAACTTATTCGTGGTTTTA 382528
Query: 927 AGGTGCTTTTGACTATTNNNNNNNCTTATTTGGAGACCAAGGCGAGGGGTCATCTTCGGC 868
||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 382529 AGGTGCTTTTGACTATTATAAAAACTTATTTGGAGACCAAGGCGAGGGGTCATCTTCGGC 382588
Query: 867 AACCAACCGGGGTCATGTGGAGCCGGCCTCCCCGCCGTCCCCCCTGCCCGCACCCTCCAT 808
|||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 382589 AACCAACCGG-------TGGAGCCGGCCTCCCCGCCGTCCCCCCTGCCCGCACCCTCCAT 382641
Query: 807 AACGGAAGTACGTAGAAACCTTGATCTGTTTACTTCCTCCTTTAATAAGATCGGGATGAG 748
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 382642 AACGGAAGTACGTAGAAACCTTGATCTGTTTACTTCCTCCTTTAATAAGATCGGGATGAG 382701
Query: 747 GAGTGACCTTTTACTGGACCTCGAGGATCGGCTTAAACTTGAAACTGCCTCAGAAGCAAA 688
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 382702 GAGTGACCTTTTACTGGACCTCGAGGATCGGCTTAAACTTGAAACTGCCTCAGAAGCAAA 382761
Query: 687 GAGAGGCAAAATAATCGAATTTATGGAGATCTTGGCCTTTGATGAAGATGAACTGATATA 628
|||| |||||||||| ||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 382762 GAGACGCAAAATAATAGAATTCATGGAGATCTTGGCCTTTGATGAAGATGAACTGATATA 382821
Query: 627 CTGGCATTCTCTTCCAACTCCGTATCCTAACTCAGGGCAAACTATCTCTAGATGGCAAAG 568
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 382822 CTGGCATTCTCTTCCAACTCCGTATCCTAACTCAGGGCAAACTCTCTCTAGATGGCAAAG 382881
Query: 567 TGAAAAGTCGAATTGATCTGCACATCCCTCTATTCCAATAGAAAATGTTAGCCTTCATCC 508
|||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 382882 TGAAAAGTAGAATTGATCTGCACATCCCTCTATTCCAATAGAAAACGTTAGCCTTCATCC 382941
Query: 507 ATGAGATCGGGGTATCACTACCAGTAGGGGCCCGCTTCCATAATAGACTTTGAAACCTCG 448
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 382942 ATGAGATCGGGGTATCACTACCAGTAGGGGCCCGCTTCCATAATAGACTTTGAAACCTCG 383001
Query: 447 CCTTCCCTTTCGATGTCCGATCCCGGATACCATGACTTGCCTTCAAACGGGCTTCACCTT 388
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 383002 CCTTCCCTTTCGATGTCCGATCCCGGATACCATGACTTGCCTTCAAACGGGCTTCACCTT 383061
Query: 387 CAAAGGAGAGTAATCGATCTGCGGACAGCAAGGCCAATGAAGATCAAATTTACCGGGGTC 328
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 383062 CAAAGGAGAGTAATCGATCTGCGGACAGCAAGGCCAATGAAGATCAAATTTACCGGGGTC 383121
Query: 327 TGAGTCGTGTCTTGTCCTTGAGTCCTCTCTATGCCTCTCATGTCCTTCTTTCCTTCGCTT 268
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 383122 TGAGTCGTGTCTTGTCCTTGAGTCCTCTCTATGCCTCTCATGTCCTTCTTTCCTTCGCTT 383181
Query: 267 GGGACTCACTAGCACACTCCTTGCTGCTTTCGTGCTTGATGGCTTCTGATGAACCAATGA 208
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 383182 GGGACTCACTAGCACACTCCTTGCTGCTTTCGTGCTTGATGGCTTCTGATGAACCAATGA 383241
Query: 207 TAGAGATCCTTCCCTAACAGCTGCTGTTCAATCCGTCCCTGAGAGTGAGAGGAGTCGTAG 148
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 383242 TAGAGATCCTTCCCTAACAGCTGCTGTTCAATCCGTCCCTGAGAGTGAGAGGAGTCGTAG 383301
Query: 147 GAATTCACATTGCCCTTTACGGCTTGGAATTCCTATTGTATAGAATAAATGTATTGGGCA 88
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 383302 GAATTCACATTGCCTTTTACGGCTTGGAATTCCTATTGTATAGAATAAATGTATTGGGCA 383361
Query: 87 ATGCCTTTCTTTTCTTGAATTCCAAAATTCTCCGCCTTTTCTCAGCTTGACACCTACTTT 28
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 383362 ATGCCTTTCTTTTCTTGAATTCAAAAATTCTCCGCCTTTTCTCAGCTTGACACCTACTTT 383421
Query: 27 AGAACCATCCTTTTCTAAGTACGACAA 1
|||||||||||||||||||||||||||
Sbjct: 383422 AGAACCATCCTTTTCTAAGTACGACAA 383455
Score = 971.846 bits (490.0), Expect = 0.0
Identities = 519/531 (98%)
Strand = Plus/Minus
Query: 1660 TGCTATATNTACTANCGCTTCNTCCTANCCAACTATNNNTGATATAAAGCCGTTCTATAG 1601
|||||||| ||||| |||||| ||||| |||||||| ||| ||||||||||||||||
Sbjct: 381826 TGCTATATCTACTAACGCTTCATCCTAACCAACTATACCTGAGATAAAGCCGTTCTATAA 381885
Query: 1600 AAATGAAAGACAAGAAGAAAGCAAGAAAAGGATAGCGATCGCTTTGGGAACGTCACGGGG 1541
|||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381886 AAATTCAAGACAAGAAGAAAGCAAGAAAAGGATAGCGATCGCTTTGGGAACGTCACGGGG 381945
Query: 1540 GAGGAAGATAGAAAGGTAACCTATGACACCGGGGAATTACGCTTTTTCTCCCGCCTCAGC 1481
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381946 GAGGAAGATAGAAAGGTAACCTATGACACCGGGGAATTACGCTTTTTCTCCCGCCTCAGC 382005
Query: 1480 TTCGCGGATGGAAGGAGGGCGAGAGCGTAGCACGCACGCTCTATGCTTTTCGCCAGCTTT 1421
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 382006 TTCGCGGATGGAAGGAGGGCGAGAGCGTAGCACGCACGCTCTATGCTTTTCGCCAGCTTT 382065
Query: 1420 CCCTCTAGTAAAAGATTAGCTCGTACCCTCTCTCTGTGTCTAGGGATTCCTGGGGCATGA 1361
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 382066 CCCTCTAGTAAAAGATTAGCTCGTACCCTCTCTCTGTGTCTAGGGATTCCTGGGGCATGA 382125
Query: 1360 GTTAAGCATATAGTTGATTGCTCTTTCTTTCGATTGAGCGTCGGTACTTTTGGAGTCTCT 1301
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 382126 GTTAAGCATATAGTTGATTGCTCTTTCTTTCGATTGAGCGTCGGTACTTTTGGAGTCTCT 382185
Query: 1300 CTCTGTAGGCGTGCAAAACAACAGAGCCACTGCTCTTCGGGGTGATGAGGTGGACAATTC 1241
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 382186 CTCTGTAGGCGTGCAAAACAACAGAGCCACTGCTCTTCGGGGTGATGAGGTGGACAATTC 382245
Query: 1240 CTTACTCCAGCTTCAAAGGAGCATCTTTGCATGAATCAATACTAACTCCTCAGTCAGCTG 1181
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 382246 CTTACTCCAGCTTCAAAGGAGCATCTTTGCATGAATCAATACTAACTCCTCAGTCAGCTG 382305
Query: 1180 ACCTTCTATTTCGGAGATTAGAGCAGAAGAACTCCGTAACGGCGGAGAGGG 1130
|||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 382306 ACCTTCGATTTCGGAGATTAGAGCAGAAGAACTCCGTAACGGCGGAGAGGG 382356
Score = 59.9635 bits (30.0), Expect = 6.45419e-10
Identities = 33/34 (97%)
Strand = Plus/Plus
Query: 1094 CGAAGCCCCTCTCCTTAGAGTCAAGTGGCTTTCA 1127
|||||| |||||||||||||||||||||||||||
Sbjct: 227966 CGAAGCTCCTCTCCTTAGAGTCAAGTGGCTTTCA 227999
Score = 54.0164 bits (27.0), Expect = 3.98186e-08
Identities = 27/27 (100%)
Strand = Plus/Plus
Query: 1097 AGCCCCTCTCCTTAGAGTCAAGTGGCT 1123
|||||||||||||||||||||||||||
Sbjct: 213049 AGCCCCTCTCCTTAGAGTCAAGTGGCT 213075
Score = 54.0164 bits (27.0), Expect = 3.98186e-08
Identities = 30/31 (97%)
Strand = Plus/Minus
Query: 1126 GAAAGCCACTTGACTCTAAGGAGAGGGGCTT 1096
|||||||||||||||||||||||||| ||||
Sbjct: 219077 GAAAGCCACTTGACTCTAAGGAGAGGAGCTT 219107
Score = 54.0164 bits (27.0), Expect = 3.98186e-08
Identities = 27/27 (100%)
Strand = Plus/Minus
Query: 1127 TGAAAGCCACTTGACTCTAAGGAGAGG 1101
|||||||||||||||||||||||||||
Sbjct: 230170 TGAAAGCCACTTGACTCTAAGGAGAGG 230196
Score = 48.0694 bits (24.0), Expect = 2.45657e-06
Identities = 33/36 (92%)
Strand = Plus/Plus
Query: 1092 GGCGAAGCCCCTCTCCTTAGAGTCAAGTGGCTTTCA 1127
|||| ||| |||||||||| ||||||||||||||||
Sbjct: 128501 GGCGGAGCTCCTCTCCTTACAGTCAAGTGGCTTTCA 128536
Score = 46.087 bits (23.0), Expect = 9.70684e-06
Identities = 26/27 (96%)
Strand = Plus/Plus
Query: 1101 CCTCTCCTTAGAGTCAAGTGGCTTTCA 1127
|||||||||| ||||||||||||||||
Sbjct: 66442 CCTCTCCTTACAGTCAAGTGGCTTTCA 66468
Score = 46.087 bits (23.0), Expect = 9.70684e-06
Identities = 26/27 (96%)
Strand = Plus/Plus
Query: 1101 CCTCTCCTTAGAGTCAAGTGGCTTTCA 1127
|||||||||| ||||||||||||||||
Sbjct: 84281 CCTCTCCTTACAGTCAAGTGGCTTTCA 84307
Score = 46.087 bits (23.0), Expect = 9.70684e-06
Identities = 26/27 (96%)
Strand = Plus/Plus
Query: 1101 CCTCTCCTTAGAGTCAAGTGGCTTTCA 1127
|||||||||| ||||||||||||||||
Sbjct: 285781 CCTCTCCTTACAGTCAAGTGGCTTTCA 285807
Score = 46.087 bits (23.0), Expect = 9.70684e-06
Identities = 26/27 (96%)
Strand = Plus/Minus
Query: 1127 TGAAAGCCACTTGACTCTAAGGAGAGG 1101
|||||||||||||||| ||||||||||
Sbjct: 296943 TGAAAGCCACTTGACTGTAAGGAGAGG 296969
Score = 46.087 bits (23.0), Expect = 9.70684e-06
Identities = 26/27 (96%)
Strand = Plus/Plus
Query: 1101 CCTCTCCTTAGAGTCAAGTGGCTTTCA 1127
|||||||||| ||||||||||||||||
Sbjct: 398915 CCTCTCCTTACAGTCAAGTGGCTTTCA 398941
Score = 46.087 bits (23.0), Expect = 9.70684e-06
Identities = 26/27 (96%)
Strand = Plus/Plus
Query: 1101 CCTCTCCTTAGAGTCAAGTGGCTTTCA 1127
|||||||||| ||||||||||||||||
Sbjct: 417192 CCTCTCCTTACAGTCAAGTGGCTTTCA 417218
Database: /home/vicky/BKPVICKY/BLASTdb/tabaco.fasta
Number of letters in database: 430597
Number of sequences in database: 1
Lambda K H
1.37 0.711 1.31
Matrix: BLASTN matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 1
Length of database: 430597