BLASTN 2.2.18 Mar-02-2008
Reference: Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,  Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),  "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs",  Nucleic Acids Res. 25:3389-3402.

Query= Contig196
         (987 letters)
Database: /home/vicky/BKPVICKY/BLASTdb/tabaco.fasta
         1 sequences; 430597 total letters
Searching................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value
gi|57013877|ref|NC_006581.1| Nicotiana tabacum mitochondrion ... 1572.5    0.0

>ref|NC_006581.1| Nicotiana tabacum mitochondrion, complete genome 

 Length = 430597


Score = 1572.5 bits (793.0), Expect = 0.0
Identities = 936/995 (94%)
Strand = Plus/Minus

Query: 982    CCAGAGNNGACCATTNGCNTAGAGTATCNTCTGATCACTNTCCTCTAGTAATCTTCTTAG 923
              ||||||  ||||||| || ||||||||| |||||||||| ||||||||||||||||||||
Sbjct: 237103 CCAGAGTTGACCATTTGCCTAGAGTATCCTCTGATCACTCTCCTCTAGTAATCTTCTTAG 237162

Query: 922    AAGATTATAATACTCGCAGGCCTGGGGTCTTTCGTTTCCAAAGAATGTGGATTCGGCATT 863
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 237163 AAGATTATAATACTCGCAGGCCTGGGGTCTTTCGTTTCCAAAGAATGTGGATTCGGCATT 237222

Query: 862    ---------ACATTGATCTCAACCATGCTCGGGAAATCCTTTTCAAGTCTTCTCCAGGAA 812
                       |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 237223 CTGATTTTCACATTGATCTCAACCATGCTCGGGAAATCCTTTTCAAGTCTTCTCCAGGAA 237282

Query: 811    GATTGACTCGACAAATAAAGCACTGAATTGGCGAACTATTTCAGAATATAGAAATGCCGA 752
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 237283 GATTGACTCGACAAATAAAGCACTGAATTGGCGAACTATTTCAGAATATAGAAATGCCGA 237342

Query: 751    AAACGAAGAAGGCCAATTTGCTCTTGAACAGAGTTGGTCTGCTGATAAGAAAATGGAGTT 692
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||   |||
Sbjct: 237343 AAACGAAGAAGGCCAATTTGCTCTTGAACAGAGTTGGTCTGCTGATAAGAAAATTCCGTT 237402

Query: 691    AGATTCGGCCAAGAGTAACCTTGAAAAACTTCTGCTTTACGAAGAAAGATAGAGAATAAG 632
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 237403 AGATTCGGCCAAGAGTAACCTTGAAAAACTTCTGCTTTACGAAGAAAGATAGAGAATAAG 237462

Query: 631    CACCTTGAACCAAATTCAGAACTTGTCTCTGTATGGCAGGAAGCTCTCAATTTATTTCAT 572
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 237463 CACCTTGAACCAAATTCAGAACTTGTCTCTGTATGGCAGGAAGCTCTCAATTTATTTCAT 237522

Query: 571    ACATTACTTTCTTCTCAAGGTTCGGTGCTTGAAGATGAGATCCTTGAGACCATCCCCTCT 512
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 237523 ACATTACTTTCTTCTCAAGGTTCGGTGCTTGAAGATGAGATCCTTGAGACCATCCCCTCT 237582

Query: 511    CTAGTCACAGAGGAAGATAATAAGATGCTTACGAGCCCTCCTAATATGGAAGAAGTTTAA 452
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 237583 CTAGTCACAGAGGAAGATAATAAGATGCTTACGAGCCCTCCTAATATGGAAGAAGTTCAA 237642

Query: 451    AAGGTAATTTTTAGCATGTCGGCGCGCACTAACCCNNNNNNNGGTCTCCCCTATCCTTTA 392
              ||||||||||| |||||||||||||||||||||||       ||||||||||||||||||
Sbjct: 237643 AAGGTAATTTTGAGCATGTCGGCGCGCACTAACCCAAAAAAAGGTCTCCCCTATCCTTTA 237702

Query: 391    AAGCCATCAGGCTTTCCGGATTCTTTTTATATAGAAAATATTGTTGGGATTTCAAAAACT 332
              |||||    |||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 237703 AAGCCTGATGGCTTTCCGGATTCTTTTTATATATAAAATATTGTTGGGATTTCAAAAACT 237762

Query: 331    TCCAGCCGGTCACCTTATTTCTTCGCTGAAGGTGCGATCCCCCGTTCCATCAATGCTACT 272
              |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 237763 TCCAGCTGGTCACCTTATTTCTTCGCTGAAGGTGCGATCCCCCGTTCCATCAATGCTACT 237822

Query: 271    TTCCTTGCTTTGATTCCTAATATTTTGATCTAGGACTACCTCTATTTAAATCTNNNNNNN 212
              |||||||||||||||||||||||||| ||||||||||||||||||||||||||       
Sbjct: 237823 TTCCTTGCTTTGATTCCTAATATTTTTATCTAGGACTACCTCTATTTAAATCTAAAAAAA 237882

Query: 211    NNNNNTTCTCATCTTCTGGATAGAGTATAAAATAAAGTGGTAGGAGATGAAAGCATTGTT 152
                   |||| ||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 237883 AAAATTTCTTATCTTCTGGATAGAGTATAAAATAAAGTGGTAGGAGATGAAAGCATTCTT 237942

Query: 151    ATCCAGTGG----------ATTTTGCAAACATGTTCTTTTCTCGATGCCTATACACCTTC 102
              |||||||||          |||||||||||||||||||||||||||||||||||||||||
Sbjct: 237943 ATCCAGTGGAGGGCGGCTTATTTTGCAAACATGTTCTTTTCTCGATGCCTATACACCTTC 238002

Query: 101    TTGCAGGGATTCCAGTTTCAAAGGGAGTTCTTGACCAGTTGGAAAAAATGTTAGCTAACT 42
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 238003 TTGCAGGGATTCCAGTTTCAAAGGGAGTTCTTGACCAGTTGGAAAAAATGTTAGCTAACT 238062

Query: 41     TTTGGGGAGGCGGTGATGAAGACAAAAGAAAGCTT 7
              ||||| |||||||||||||||||||||||||||||
Sbjct: 238063 TTTGGTGAGGCGGTGATGAAGACAAAAGAAAGCTT 238097


  Database: /home/vicky/BKPVICKY/BLASTdb/tabaco.fasta
  Number of letters in database: 430597
  Number of sequences in database:  1

Lambda     K      H
    1.37    0.711     1.31

Matrix: BLASTN matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 1
Length of database: 430597